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Forster, Dominik / Dunthorn, Micah / Mahe, Frederic / Dolan, John R. / Audic, Stephane / Bass, David / Bittner, Lucie / Boutte, Christophe / Christen, Richard / Claverie, Jean-michel / Decelle, Johan / Edvardsen, Bente / Egge, Elianne / Eikrem, Wenche / Gobet, Angelique / Kooistra, Wiebe H. C. F. / Logares, Ramiro / Massana, Ramon / Montresor, Marina / Not, Fabrice / Ogata, Hiroyuki / Pawlowski, Jan / Pernice, Massimo C. / Romac, Sarah / Shalchian-tabrizi, Kamran / Simon, Nathalie / Richards, Thomas A. / Santini, Sebastien / Sarno, Diana / Siano, Raffaele / Vaulot, Daniel / Wincker, Patrick / Zingone, Adriana / De Vargas, Colomban / Stoeck, Thorsten - 2016Marine protist diversity inventories have largely focused on planktonic environments, while benthic protists have received relatively little attention. We therefore hypothesize that current diversity surveys have only skimmed the surface of protist diversity in marine sediments, which may harbour...Contributeur (s):
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Massana, Ramon / Gobet, Angelique / Audic, Stephane / Bass, David / Bittner, Lucie / Boutte, Christophe / Chambouvet, Aurelie / Christen, Richard / Claverie, Jean-michel / Decelle, Johan / Dolan, John R. / Dunthorn, Micah / Edvardsen, Bente / Forn, Irene / Forster, Dominik / Guillou, Laure / Jaillon, Olivier / Kooistra, Wiebe H. C. F. / Logares, Ramiro / Mahe, Frederic / Not, Fabrice / Ogata, Hiroyuki / Pawlowski, Jan / Pernice, Massimo C. / Probert, Ian / Romac, Sarah / Richards, Thomas / Santini, Sebastien / Shalchian-tabrizi, Kamran / Siano, Raffaele / Simon, Nathalie / Stoeck, Thorsten / Vaulot, Daniel / Zingone, Adriana / De Vargas, Colomban - 2015Although protists are critical components of marine ecosystems, they are still poorly characterized. Here we analysed the taxonomic diversity of planktonic and benthic protist communities collected in six distant European coastal sites. Environmental deoxyribonucleic acid (DNA) and ribonucleic acid...Contributeur (s):
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Morard, Raphael / Quillevere, Frederic / Escarguel, Gilles / Ujiie, Y / DE GARIDEL-THORON, Thibault / Norris, Rd / De Vargas, Colomban - 2009International audienceContributeur (s):
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coiling dimorphism within a genetic type of the planktonic foraminifer globorotalia truncatulinoidesUjiie, Y / DE GARIDEL-THORON, Thibault / Watanabe, S / Wiebe, P / De Vargas, Colomban - 2010International audienceContributeur (s):
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Goddéris, Yves / Donnadieu, Yannick / De Vargas, Colomban / Pierrehumbert, Raymond T. / Dromart, Gilles / Van De Schootbrugge, Bas - 2008International audienceContributeur (s):
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Decelle, Johan / Martin, Patrick / Paborstava, Katsiaryna / Pond, David W / Tarling, Geraint / Mahé, Frédéric / De Vargas, Colomban / Lampitt, Richard / Not, Fabrice - 2015International audienceContributeur (s):
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De Vargas, Colomban / Audic, Stephane / Henry, Nicolas / Decelle, Johan / Mahe, Frederic / Logares, Ramiro / Lara, Enrique / Berney, Cedric / Le Bescot, Noan / Probert, Ian / Carmichael, Margaux / Poulain, Julie / Romac, Sarah / Colin, Sebastien / Aury, Jean-marc / Bittner, Lucie / Chaffron, Samuel / Dunthorn, Micah / Engelen, Stefan / Flegontova, Olga / Guidi, Lionel / Horak, Ales / Jaillon, Olivier / Lima-mendez, Gipsi / Lukes, Julius / Malviya, Shruti / Morard, Raphael / Mulot, Matthieu / Scalco, Eleonora / Siano, Raffaele / Vincent, Flora / Zingone, Adriana / Dimier, Celine / Picheral, Marc / Searson, Sarah / Kandels-lewis, Stefanie / Acinas, Silvia G. / Bork, Peer / Bowler, Chris / Gorsky, Gabriel / Grimsley, Nigel / Hingamp, Pascal / Iudicone, Daniele / Not, Fabrice / Ogata, Hiroyuki / Pesant, Stephane / Raes, Jeroen / Sieracki, Michael E. / Speich, Sabrina / Stemmann, Lars / Sunagawa, Shinichi / Weissenbach, Jean / Wincker, Patrick / Karsenti, Eric - 2015Marine plankton support global biological and geochemical processes. Surveys of their biodiversity have hitherto been geographically restricted and have not accounted for the full range of plankton size. We assessed eukaryotic diversity from 334 size-fractionated photic-zone plankton communities...Contributeur (s):
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Logares, Ramiro / Audic, Stephane / Bass, David / Bittner, Lucie / Boutte, Christophe / Christen, Richard / Claverie, Jean-michel / Decelle, Johan / Dolan, John R. / Dunthorn, Micah / Edvardsen, Bente / Gobet, Angelique / Kooistra, Wiebe H. C. F. / Mahe, Frederic / Not, Fabrice / Ogata, Hiroyuki / Pawlowski, Jan / Pernice, Massimo C. / Romac, Sarah / Shalchian-tabrizi, Kamran / Simon, Nathalie / Stoeck, Thorsten / Santini, Sebastien / Siano, Raffaele / Wincker, Patrick / Zingone, Adriana / Richards, Thomas A. / De Vargas, Colomban / Massana, Ramon - 2014Background Biological communities are normally composed of a few abundant and many rare species. This pattern is particularly prominent in microbial communities, in which most constituent taxa are usually extremely rare. Although abundant and rare subcommunities may present intrinsic...Contributeur (s):
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Carrier, Gregory / Garnier, Matthieu / Le Cunff, Loic / Bougaran, Gael / Probert, Ian / De Vargas, Colomban / Corre, E / Cadoret, Jean-paul / Saint-jean, Bruno - 2014The applied exploitation of microalgae cultures has to date almost exclusively involved the use of wild type strains, deposited over decades in dedicated culture collections. Concomitantly, the concept of improving algae with selection programs for particular specific purposes is slowly emerging....Contributeur (s):
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Guillou, Laure / Bachar, Dipankar / Audic, S / Bass, David / Berney, Cedric / Bittner, Lucie / Boutte, Christophe / Burgaud, Gaetan / De Vargas, Colomban / Decelle, Johan / Del Campo, Javier / Dolan, John R. / Dunthorn, Micah / Edvardsen, Bente / Holzmann, Maria / Kooistra, Wiebe H. C. F. / Lara, Enrique / Le Bescot, Noan / Logares, Ramiro / Mahe, F / Massana, Ramon / Montresor, Marina / Morard, Raphael / Not, Fabrice / Pawlowski, Jan / Probert, Ian / Sauvadet, Anne-laure / Siano, Raffaele / Stoeck, Thorsten / Vaulot, Daniel / Zimmermann, Pascal / Christen, Richard - 2013The interrogation of genetic markers in environmental meta-barcoding studies is currently seriously hindered by the lack of taxonomically curated reference data sets for the targeted genes. The Protist Ribosomal Reference database (PR2, http://ssurrna. org/) provides a unique access to eukaryotic...Contributeur (s):
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Karsenti, Eric / Acinas, Silvia G. / Bork, Peer / Bowler, Chris / De Vargas, Colomban / Raes, Jeroen / Sullivan, Matthew / Arendt, Detlev / Benzoni, Francesca / Claverie, Jean-michel / Follows, Mick / Gorsky, Gaby / Hingamp, Pascal / Iudicone, Daniele / Jaillon, Olivier / Kandels-lewis, Stefanie / Krzic, Uros / Not, Fabrice / Ogata, Hiroyuki / Pesant, Stephane / Reynaud, Emmanuel Georges / Sardet, Christian / Sieracki, Michael E. / Speich, Sabrina / Velayoudon, Didier / Weissenbach, Jean / Wincker, Patrick - 2011Contributeur (s):
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Goddéris, Yves / Donnadieu, Yannick / De Vargas, Colomban / Pierrehumbert, Raymond T. / Dromart, Gilles / Van De Schootbrugge, Bas - article in peer-reviewed journal - 2008On the basis of a global carbon-climate numerical model, we reconstructed atmospheric carbon dioxide concentrations over the first 60 million years of the Mesozoic. Our analysis indicates that pCO2 declined from more than 3000 ppmv to less than 1000 ppmv, with a drastic drop during the Late...Contributeur (s):
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Decelle, Johan / Martin, Patrick / Paborstava, Katsiaryna / Pond, David W / Tarling, Geraint / Mahé, Frédéric / De Vargas, Colomban / Lampitt, Richard / Not, Fabrice - article in peer-reviewed journal - 2013Marine planktonic organisms that undertake active vertical migrations over their life cycle are important contributors to downward particle flux in the oceans. Acantharia, globally distributed heterotrophic protists that are unique in building skeletons of celestite (strontium sulfate), can produce...Contributeur (s):